
ARP Transcriptomics Hiseq 51478
Data and Resources
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
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51478_PE_200bp_SEP_AGRF_CD2ANANX ... Access denied FASTQ
Additional Info
Field | Value |
---|---|
Geospatial Coverage | |
Resource Permissions | organization_member |
additional_notes | |
analytical_platform | HiSeq |
archive_ingestion_date | |
archive_ingestion_dates | 13/11/2018 |
barcode_tag | AGTACTCC-AACCTGTT |
casava_version | bcl2fastq v2.20.0.422 |
concentration_ng_per_ul | |
contact_researcher | Dick Strugnell |
contextual_data_submission_date | 2018-08-17 |
culture_collection_date | 2002-10-23 |
culture_collection_id | |
data_generated | True |
data_type | Main dataset |
either_260_280 | |
facility | AGRF |
flow_cell_ids | CD2ANANXX |
gram_stain | NEG |
growth_condition_growth_phase | Mid log phase |
growth_condition_media | RPMI |
growth_condition_od600_reading | 4.75 |
growth_condition_temperature | |
growth_condition_time_(h) | 1 hr |
growth_media | RPMI |
host_age | 66 |
host_description | |
host_disease_outcome | Sepsis |
host_dob | |
host_location | Victoria, Australia (Alfred Hospital, Melbourne) |
host_sex | F |
isolation_source | Blood |
key_virulence_genes | |
library_construction_protocol | Truseq Stranded mRNA |
omics | Transcriptomics |
publication_reference | |
quantification_method | |
replicate | |
sample | 51515 |
sample_id | 102.100.100/51478 |
sample_submission_date | 2018-08-08 |
sample_type | RNA |
sequencer | HiSeq 2500 |
serovar | K61 |
strain_description | |
strain_or_isolate | AJ292 |
taxon_or_organism | Klebsiella variicola |
ticket | BPAOPS-742 |
volume_ul | |
work_order |