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ARP Metabolomics GCMS 51556

ARP Metabolomics GCMS Raw Data: Klebsiella variicola AJ292 Pooled sera Replicate 6

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type metabolomics
acquisition_mode Negative Ion (45-600 mz: 2000 scan speed)
archive_ingestion_date
contact_researcher Dick Strugnell
contextual_data_submission_date 17/8/18
culture_collection_date 2002-10-23
culture_collection_id
data_generated True
data_type Main dataset
facility MA
gc_column_type Agilent DB-5; 1um film thicknes; 0.250mm diameter; 30m length
gradient_time_min_flow 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes.
gram_stain NEG
growth_media Pooled sera
host_age 66
host_description
host_disease_outcome Sepsis
host_dob
host_location Victoria, Australia (Alfred Hospital, Melbourne)
host_sex F
isolation_source Blood
key_virulence_genes
mass_spectrometer Shimadzu TQ8040
omics Metabolomics
publication_reference
raw_file_name 51556_Sep_MA_GCMS_AJ292S-6-612-35228_Bio21_GC-QQQ-Shimadzu.qgd
replicate 6
sample_fractionation_extract_solvent Polar metabolite / Methanol:Water
sample_id 102.100.100/51556
sample_submission_date 2018-08-21
serovar K61
strain_description
strain_or_isolate AJ292
taxon_or_organism Klebsiella variicola
ticket BPAOPS-883
work_order