Sepsis Genomics Pacbio 25769

ARP Genomics Pacbio Raw Data: Escherichia coli MS14387 Luria broth Replicate 1

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type pacbio-clr
analytical_facility Ramaciotti
archive_ingestion_date 2016-09-12
cell_position E02
contact_researcher Mark Schembri
contextual_data_submission_date 2016-07-20
culture_collection_date 2009-09-03
culture_collection_id PA17B
data_generated True
data_type Main dataset
experimental_replicate 1
experimental_sample_preparation_method MoBio genomic DNA extraction kit
facility RAMACIOTTI
gram_stain NEG
growth_condition_media Luria broth
growth_condition_notes
growth_condition_temperature 37.0
growth_condition_time_(h) Overnight growth
growth_media Luria broth
host_age
host_description
host_disease_outcome
host_dob
host_location Queensland, Australia (Princess Alexandra Hospital, Brisbane)
host_sex
insert_size_range 15-50kb
isolation_source Blood
key_virulence_genes
library_construction_protocol 20kb template prep_blue pippin
omics Genomics
publication_reference
replicate 1
rs_version RS Remote v2.3
sample_id 102.100.100/25769
sample_submission_date 2016-07-16
sequencer PacBio RSII
sequencer_run_id m160813_124013_42272
serovar
smrt_cell_id c101036162550000001823252711171614
strain_description ST69
strain_or_isolate MS14387
taxon_or_organism Escherichia coli
ticket BPAOPS-4
work_order Work order 2