Sepsis Genomics Pacbio 25745

ARP Genomics Pacbio Raw Data: Staphylococcus aureus BPH2760 BHI broth Replicate 1

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type pacbio-clr
analytical_facility Ramaciotti
archive_ingestion_date 2016-08-17
cell_position A01
contact_researcher Tim Stinear
contextual_data_submission_date 2016-05-07
culture_collection_date 2007-09-28
culture_collection_id
data_generated True
data_type Main dataset
experimental_replicate 1
experimental_sample_preparation_method Phenol-chloroform; Phase-lock gel tubes
facility RAMACIOTTI
gram_stain POS
growth_condition_media BHI broth
growth_condition_notes Horse blood agar for streaking (from glycerol) then overnight in BHI broth
growth_condition_temperature 37.0
growth_condition_time_(h) Overnight growth
growth_media BHI broth
host_age 38
host_description
host_disease_outcome Bacteraemia
host_dob
host_location Victoria, Australia (Melbourne)
host_sex M
insert_size_range 15-50kb
isolation_source Blood culture
key_virulence_genes
library_construction_protocol 20kb template prep_blue pippin
omics Genomics
publication_reference Holmes, N. et al., - unpublished
replicate 1
rs_version RS Remote v2.3
sample_id 102.100.100/25745
sample_submission_date 2016-05-07
sequencer PacBio RSII
sequencer_run_id m160725_054223
serovar
smrt_cell_id c101035812550000001823252711171667
strain_description ST1MSSA
strain_or_isolate BPH2760
taxon_or_organism Staphylococcus aureus
ticket BRLOPS-845
work_order Work order 4