Wheat Pathogens Transcript Sample 102.100.100.14357 Information

Project Pyrenophora in-vitro transcript
Sample Name C.Moffat P2
Contact Scientist DrCaroline Moffat
Contact Scientist email Caroline.Moffat@curtin.edu.au
Institution Australian Centre for Necrotrophic Fungal Pathogens (ACNFP)
Species Fungus (Pyrenophoratritici-repentis), Plant (wheat)
Sample Type RNA
RNA Source Mycelia (fungus), uninfected and ptr infected leaves (plant)
Extraction Method Trizol reagent and column purification; Trizol reagent andcolumn purification followed by LiCl re-precipitation
Growth Protocol Fungus Ptr cultures grown on V8PDA agar, Plant Wheat seedlings grown on vermiculite without fertiliser
Treatment Protocol Plant infection assay, whole plant (foliar)spray
Experimental Design Fungal mycelia, vegetative and sporulating mycelia harvested at one time point Plant infection assay fungal infected and uninfected wheat leaves harvested at three and four DPI, RNA pooled from biological replicates
Note Ptr infected leaves (4 DPI),RNA pooled from 6 replicates
2 Related Sequence files available for BPA Sample ID 102.100.100.14357
Filename MD5 Run Description
CM_P2_GGCTAC_L005_R1_001.fastq.gz 477d6ec63671fc404b2bb8469c499eb3 Run 138 for C.Moffat P2
CM_P2_GGCTAC_L005_R2_001.fastq.gz 5eb8c362166a1a8d6b1a457b3b88cf87 Run 138 for C.Moffat P2
You can use the URL list below with tools like wget or curl to fetch only the listed sequence files from the archive.

https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/CM_P2_GGCTAC_L005_R1_001.fastq.gz
https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/CM_P2_GGCTAC_L005_R2_001.fastq.gz