Wheat Pathogens Transcript Sample BPAUniqueID object ( Information

Project Pyrenophora in-vitro transcript
Sample Name C.Moffat C1
Contact Scientist dmoffat
Contact Scientist email Caroline.Moffat@curtin.edu.au
Institution Australian Centre for Necrotrophic Fungal Pathogens (ACNFP)
Species Fungus (Pyrenophoratritici-repentis), Plant (wheat)
Sample Type RNA
RNA Source Mycelia (fungus), uninfected and ptr infected leaves (plant)
Extraction Method Trizol reagent and column purification; Trizol reagent andcolumn purification followed by LiCl re-precipitation
Growth Protocol Fungus Ptr cultures grown on V8PDA agar, Plant Wheat seedlings grown on vermiculite without fertiliser
Treatment Protocol Plant infection assay, whole plant (foliar)spray
Experimental Design Fungal mycelia, vegetative and sporulating mycelia harvested at one time point Plant infection assay fungal infected and uninfected wheat leaves harvested at three and four DPI, RNA pooled from biological replicates
Note Control leaves (3 DPI),RNA pooled from 3 replicates
2 Related Sequence files available for BPA Sample ID BPAUniqueID object (
Filename MD5 Run Description
CM_C1_CGATGT_L005_R2_001.fastq.gz d0c6b5d48d2f885cdb3d48ee629177ab WheatPathogenTranscriptRun object (30)
CM_C1_CGATGT_L005_R1_001.fastq.gz cd53b8736ce0bd5204b799e36343bbce WheatPathogenTranscriptRun object (30)
You can use the URL list below with tools like wget or curl to fetch only the listed sequence files from the archive.