Project | Rhizoctonia infected and vegetative tissue - small RNA |
Sample Name | JA13 |
Contact Scientist | janderson |
Contact Scientist email | |
Institution | CSIRO |
Species | Wheat and Rhizoctonia solani |
Sample Type | RNA |
RNA Source | Infected wheat roots |
Extraction Method | Trizol, ribozero ribosomal subtraction kit, strand specific library prep |
Growth Protocol | |
Treatment Protocol | |
Experimental Design | |
Note | In vitro grown Rs AG8-1 (defined minimal medium liquid, 25C shaking) rep 1 |
Filename | MD5 | Run Description |
---|---|---|
JA_R13_ACTGAT_L002_R1_001.fastq.gz | fe7e786d37d82c24817e26c182397510 | WheatPathogenTranscriptRun object (23) |
JA_R13_ACTGAT_L008_R1_001.fastq.gz | 2ed0f510518ba95498157a00f8d81f8a | WheatPathogenTranscriptRun object (23) |
wget
or curl
to fetch only the listed sequence files from the archive.
https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/JA_R13_ACTGAT_L002_R1_001.fastq.gz
https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/JA_R13_ACTGAT_L008_R1_001.fastq.gz