Project | Fusarium infected and vegetative tissue - small RNA |
Sample Name | M114 |
Contact Scientist | dgardiner |
Contact Scientist email | |
Institution | CSIRO Plant Industry |
Species | Wheat (Fusarium) |
Sample Type | Small RNA |
RNA Source | Shoots |
Extraction Method | Trizol |
Growth Protocol | Wheat cv Kennedy germinated for two days in petri dishes prior to inoculation with either water or Fusarium in an in vitro assay (paper towel) |
Treatment Protocol | Mock infected 5 dpi |
Experimental Design | biological replicates |
Note | Mock infected 5 dpi |
Filename | MD5 | Run Description |
---|---|---|
M114_CAGATC_L001_R1_001.fastq.gz | b23ce12d87f4d99b1c006db55c516bab | WheatPathogenTranscriptRun object (6) |
M114_CAGATC_L008_R1_001.fastq.gz | 488d54a53bca51782f2640d1cbf71d42 | WheatPathogenTranscriptRun object (6) |
wget
or curl
to fetch only the listed sequence files from the archive.
https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/M114_CAGATC_L001_R1_001.fastq.gz
https://downloads-qcif.bioplatforms.com/bpa/wheat_pathogens_transcript/all/M114_CAGATC_L008_R1_001.fastq.gz